VIRsiRNAid | siRNA Sequence | Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
virsi2168 | uccauaugcuguaugugau | Human Papillomavirus [HPV] | E7 | CaSki | mRNA | Low | 16611884 | Blast SL | refseqs |       |
virsi1743 | cacgagcaauuaagcga | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 91 | 20885450 | Blast SL | refseqs |       |
virsi1731 | ggaagaaaacgaugaaaua | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 85 | 15908516 | Blast SL | refseqs |       |
virsi1767 | aggaggaugaaauagaugg | Human Papillomavirus [HPV] | E7 | SiHa | mRNA | 85 | 15665592 | Blast SL | refseqs |       |
virsi1740 | ucucuacuguuaugagcaauua | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 82 | 20885450 | Blast SL | refseqs |       |
virsi1730 | ggcaacauugcaagacauu | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 80 | 15908516 | Blast SL | refseqs |       |
virsi1760 | cuucgguugugcguacaaagc | Human Papillomavirus [HPV] | E7 | SiHa | mRNA | 76 | 18157144 | Blast SL | refseqs |       | Pubmed:
18157144 Article:
New highly potent and specific E6 and E7 siRNAs for treatment of HPV16 positive cervical cancer.Authors:
Yamato K, Yamada T, Kizaki M, Ui-Tei K, Natori Y, Fujino M, Nishihara T, Ikeda Y, Nasu Y, Saigo K, Yoshinouchi M.Journal:
Cancer Gene Ther. 2008 Mar;15(3):140-53. Epub 2007 Dec 21.Entrez:
18157144
virsi1690 | auagugaccuguugcugug | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 75 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1689 | acaagacgcacaaccuuua | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 74 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1759 | gcccauuacaauauuguaacc | Human Papillomavirus [HPV] | E7 | SiHa | mRNA | 74 | 18157144 | Blast SL | refseqs |       | Pubmed:
18157144 Article:
New highly potent and specific E6 and E7 siRNAs for treatment of HPV16 positive cervical cancer.Authors:
Yamato K, Yamada T, Kizaki M, Ui-Tei K, Natori Y, Fujino M, Nishihara T, Ikeda Y, Nasu Y, Saigo K, Yoshinouchi M.Journal:
Cancer Gene Ther. 2008 Mar;15(3):140-53. Epub 2007 Dec 21.Entrez:
18157144
virsi1761 | caccuacauugcaugaauaua | Human Papillomavirus [HPV] | E7 | SiHa | mRNA | 71 | 18157144 | Blast SL | refseqs |       | Pubmed:
18157144 Article:
New highly potent and specific E6 and E7 siRNAs for treatment of HPV16 positive cervical cancer.Authors:
Yamato K, Yamada T, Kizaki M, Ui-Tei K, Natori Y, Fujino M, Nishihara T, Ikeda Y, Nasu Y, Saigo K, Yoshinouchi M.Journal:
Cancer Gene Ther. 2008 Mar;15(3):140-53. Epub 2007 Dec 21.Entrez:
18157144
virsi1739 | cucuacuguuaugagc | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 69 | 20885450 | Blast SL | refseqs |       |
virsi1758 | ccggacagagcccauuacaau | Human Papillomavirus [HPV] | E7 | SiHa | mRNA | 68 | 18157144 | Blast SL | refseqs |       | Pubmed:
18157144 Article:
New highly potent and specific E6 and E7 siRNAs for treatment of HPV16 positive cervical cancer.Authors:
Yamato K, Yamada T, Kizaki M, Ui-Tei K, Natori Y, Fujino M, Nishihara T, Ikeda Y, Nasu Y, Saigo K, Yoshinouchi M.Journal:
Cancer Gene Ther. 2008 Mar;15(3):140-53. Epub 2007 Dec 21.Entrez:
18157144
virsi1748 | gcaauuaaaugacagcuca | Human Papillomavirus [HPV] | E7 | CaSki | mRNA | 67 | 18755502 | Blast SL | refseqs |       |
virsi1742 | uucuaugucacgagcaa | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 63 | 20885450 | Blast SL | refseqs |       |
virsi1750 | gacagagcccauuacaaua | Human Papillomavirus [HPV] | E7 | CaSki | mRNA | 60 | 18755502 | Blast SL | refseqs |       |
virsi1691 | cgcgguucauaaagcuaaa | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 58 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1692 | agacaucuuagacgugcua | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 58 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1693 | gaccacagcagagauuuau | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 58 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1699 | aggaggaugaaauagaugg | Human Papillomavirus [HPV] | E7 | CaSki | mRNA | 55 | 12203116 | Blast SL | refseqs |       |
virsi1694 | acaagacgcacaaccuuua | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 55 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1695 | acauugcuaugagcaauua | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 55 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1696 | cggagacaucagacaacua | Human Papillomavirus [HPV] | E7 | B16-BL6 | mRNA | 55 | 19887612 | Blast SL | refseqs |       | Pubmed:
19887612 Article:
Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.Authors:
Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.Journal:
Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.Entrez:
19887612
virsi1744 | gcacagagcugcaaacaac | Human Papillomavirus [HPV] | E7 | CaSki | mRNA | 50 | 18755502 | Blast SL | refseqs |       |
virsi1738 | gaaauagaugguccagc | Human Papillomavirus [HPV] | E7 | HeLa | mRNA | 30 | 20885450 | Blast SL | refseqs |       |